Laboratoire bioinformatique | UQAM
Groupe de recherche en biochimie du developpement et de l'adaptation des plantes | UQAM
Wheat MicroRNA Portal
Université du Québec à Montréal

Conserved microRNA consmRNA_1835

UUGGAUUGAAGGGAGCUCU 19nt
Associated miRBase1 families
miR159 miR319 
Predicted by our predictors: NO

Hit IDHit sequence
in miRBase dataset
Internal mismatchesExternal mismatchesExternal gapsTotal mismatchesPercent identity (Blast)E-value (Blast)Family
nta-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
bdi-miR159a-3p
CUUGGAUUGAAGGGAGCUCU
00111002e-05miR159
mes-miR159b
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
ssp-miR159a
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
sbi-miR159a
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
zma-miR159k-3p
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
pta-miR159a
UUGGAUUGAAGGGAGCUCCA
01121009e-05miR159
aly-miR159b-3p
UUUGGAUUGAAGGGAGCUCUU
00221002e-05miR159
pvu-miR159a.1
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
vvi-miR159c
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
bna-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
lus-miR159c
UUUGGAUUGAAGGGAGCUCUU
00221002e-05miR159
sof-miR159d
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
zma-miR159a-3p
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
mdm-miR159a
CUUGGAUUGAAGGGAGCUCC
01121009e-05miR159
far-miR159
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
ath-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
mes-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
hvu-miR159b
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
cpa-miR159b
CUUGGAUUGAAGGGAGCUCC
01121009e-05miR159
osa-miR159a.1
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
tae-miR159a
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
bdi-miR159b-3p.1
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
zma-miR159f-3p
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
sof-miR159b
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
mtr-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
rco-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
htu-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
cme-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
zma-miR159b-3p
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
ath-miR159b-3p
UUUGGAUUGAAGGGAGCUCUU
00221002e-05miR159
ppe-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
ptc-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
atr-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
bra-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
csi-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
gma-miR159e-3p
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
hbr-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
lus-miR159b
UUUGGAUUGAAGGGAGCUCUC
00221002e-05miR159
osa-miR159b
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
ahy-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
cpa-miR159a
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
osa-miR159f
CUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
hvu-miR159a
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
sly-miR159
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
sof-miR159a
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
tae-miR159b
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
ptc-miR159b
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
gma-miR159a-3p
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
aly-miR159a-3p
UUUGGAUUGAAGGGAGCUCUA
00221002e-05miR159
zma-miR159j-3p
UUUGGAUUGAAGGGAGCUCUG
00221002e-05miR159
mdm-miR159b
CUUGGAUUGAAGGGAGCUCC
01121009e-05miR159
pta-miR319
UUGGACUGAAGGGAGCUCC
110294.440.004miR319

1Kozomara A, Griffiths-Jones S. (2014) miRBase: annotating high confidence microRNAs using deep sequencing data. NAR 2014 42:D68-D73 PMID: 21037258
 Amine M. Remita, Etienne Lord   Made with JQuery, Angular.js, Bootstrap, D3, NVD3 and jqplot