Laboratoire bioinformatique | UQAM
Groupe de recherche en biochimie du developpement et de l'adaptation des plantes | UQAM
Wheat MicroRNA Portal
Université du Québec à Montréal

Conserved microRNA consmRNA_4602

UGCAGUUGUUGUCUCAAGCUU 21nt
Associated miRBase1 families
miR444 
Predicted by our predictors: NO

Hit IDHit sequence
in miRBase dataset
Internal mismatchesExternal mismatchesExternal gapsTotal mismatchesPercent identity (Blast)E-value (Blast)Family
ssp-miR444a
UGCAGUUGUUGCCUCAAGCUU
100195.249e-05miR444
hvu-miR444b
UGCAGUUGCUGUCUCAAGCUU
100195.249e-05miR444
osa-miR444c.2
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
osa-miR444f
UGCAGUUGUUGCCUCAAGCUU
100195.249e-05miR444
ssp-miR444c-3p
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
osa-miR444b.2
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
bdi-miR444c
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
zma-miR444a
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
osa-miR444a-3p.2
UGCAGUUGCUGCCUCAAGCUU
200290.480.004miR444
osa-miR444e
UGCAGUUGCUGCCUCAAGCUU
200290.480.004miR444
ssp-miR444b.2
UGCAGUUGUUGCCUCAAGCUU
100195.249e-05miR444
osa-miR444d.2
UGCAGUUGCUGCCUCAAGCUU
200290.480.004miR444
bdi-miR444b
UGCAGUUGCUGCCUCAAGCUU
200290.480.004miR444
bdi-miR444d
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444
zma-miR444b
UGCAGUUGUUGUCUCAAGCUU
00001002e-06miR444

1Kozomara A, Griffiths-Jones S. (2014) miRBase: annotating high confidence microRNAs using deep sequencing data. NAR 2014 42:D68-D73 PMID: 21037258
 Mohamed Amine Remita, Etienne Lord   Made with JQuery, Angular.js, Bootstrap, D3, NVD3 and jqplot