Laboratoire bioinformatique | UQAM
Groupe de recherche en biochimie du developpement et de l'adaptation des plantes | UQAM
Wheat MicroRNA Portal
Université du Québec à Montréal

Conserved microRNA consmRNA_945

AGAAUCCUGAUGAUGCUGCCU 21nt
Associated miRBase1 families
miR172 
Predicted by our predictors: NO

Hit IDHit sequence
in miRBase dataset
Internal mismatchesExternal mismatchesExternal gapsTotal mismatchesPercent identity (Blast)E-value (Blast)Family
ptc-miR172i
AGAAUCCUGAUGAUGCUGCAA
02021002e-05miR172
sbi-miR172f
AGAAUCCUGAUGAUGCUGCAC
02021002e-05miR172
ghr-miR172
AGAAUCCUGAUGAUGCUGCAG
02021002e-05miR172
mtr-miR172a
AGAAUCCUGAUGAUGCUGCAG
02021002e-05miR172
tcc-miR172d
AGAAUCCUGAUGAUGCUGCAU
02021002e-05miR172
bdi-miR172d
AGAAUCCUGAUGAUGCUGCAG
02021002e-05miR172

1Kozomara A, Griffiths-Jones S. (2014) miRBase: annotating high confidence microRNAs using deep sequencing data. NAR 2014 42:D68-D73 PMID: 21037258
 Mohamed Amine Remita, Etienne Lord   Made with JQuery, Angular.js, Bootstrap, D3, NVD3 and jqplot